Interactive visualization using Vitessce

SpatialDatasets can be visualized interactively on LaminHub using Vitessce.

Here is a guide for visualizing spatial data with Vitessce.

Here is a notebook that ran on the visium dataset discussed on the previous pages and added the Vitessce visualiation to this dataset.

# clean up test instance
!rm -rf test-spatial
!lamin delete --force test-spatial

• deleting instance testuser1/test-spatial