Curate MNIST

# !pip install -q 'lamindb[jupyter,aws]' torch torchvision lightning wandb
!lamin init --storage ./lamin-mlops

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! using anonymous user (to identify, call: lamin login)

→ connected lamindb: anonymous/lamin-mlops

import lamindb as ln
from pathlib import Path

ln.context.uid = "EgmnhRJ5Hw1S0000"
ln.context.track()

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→ connected lamindb: anonymous/lamin-mlops

→ created Transform('EgmnhRJ5'), started new Run('HrCvuAIS') at 2024-11-21 05:37:35 UTC

→ notebook imports: lamindb==0.76.16 torchvision==0.20.1

Download the MNIST dataset and save it in LaminDB to keep track of the training data that is associated with our model.

from torchvision.datasets import MNIST
from torchvision.transforms import ToTensor
dataset = MNIST(Path.cwd() / "download_mnist", download=True, transform=ToTensor())

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Downloading http://yann.lecun.com/exdb/mnist/train-images-idx3-ubyte.gz
Failed to download (trying next):
HTTP Error 403: Forbidden

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/train-images-idx3-ubyte.gz

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/train-images-idx3-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/train-images-idx3-ubyte.gz

  0%|          | 0.00/9.91M [00:00<?, ?B/s]

100%|██████████| 9.91M/9.91M [00:00<00:00, 231MB/s]

Extracting /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/train-images-idx3-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw

Downloading http://yann.lecun.com/exdb/mnist/train-labels-idx1-ubyte.gz
Failed to download (trying next):
HTTP Error 403: Forbidden

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/train-labels-idx1-ubyte.gz

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/train-labels-idx1-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/train-labels-idx1-ubyte.gz

  0%|          | 0.00/28.9k [00:00<?, ?B/s]

100%|██████████| 28.9k/28.9k [00:00<00:00, 8.67MB/s]

Extracting /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/train-labels-idx1-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw

Downloading http://yann.lecun.com/exdb/mnist/t10k-images-idx3-ubyte.gz
Failed to download (trying next):
HTTP Error 403: Forbidden

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/t10k-images-idx3-ubyte.gz

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/t10k-images-idx3-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/t10k-images-idx3-ubyte.gz

  0%|          | 0.00/1.65M [00:00<?, ?B/s]

100%|██████████| 1.65M/1.65M [00:00<00:00, 47.4MB/s]

Extracting /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/t10k-images-idx3-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw

Downloading http://yann.lecun.com/exdb/mnist/t10k-labels-idx1-ubyte.gz

Failed to download (trying next):
HTTP Error 403: Forbidden

Downloading https://ossci-datasets.s3.amazonaws.com/mnist/t10k-labels-idx1-ubyte.gz
Downloading https://ossci-datasets.s3.amazonaws.com/mnist/t10k-labels-idx1-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/t10k-labels-idx1-ubyte.gz

  0%|          | 0.00/4.54k [00:00<?, ?B/s]

100%|██████████| 4.54k/4.54k [00:00<00:00, 10.5MB/s]

Extracting /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw/t10k-labels-idx1-ubyte.gz to /home/runner/work/lamin-mlops/lamin-mlops/docs/download_mnist/MNIST/raw

# no need for the zipped files
!rm -r download_mnist/MNIST/raw/*.gz
!ls -r download_mnist/MNIST/raw

train-labels-idx1-ubyte  t10k-labels-idx1-ubyte
train-images-idx3-ubyte  t10k-images-idx3-ubyte

training_data_artifact = ln.Artifact(
    "download_mnist/",
    key="testdata/mnist",
    type="dataset",
).save()
training_data_artifact

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Artifact(uid='j2FSi1RGxO1QpJNX0000', is_latest=True, key='testdata/mnist', suffix='', type='dataset', size=54950048, hash='amFx_vXqnUtJr0kmxxWK2Q', n_objects=4, _hash_type='md5-d', visibility=1, _key_is_virtual=True, storage_id=1, transform_id=1, run_id=1, created_by_id=1, created_at=2024-11-21 05:37:41 UTC)

After saving the MNIST training dataset in LaminDB, one can see the dataset showing up in LaminHub:

# save your notebook
# ln.context.finish()