Generate single-cell images

Here, we are going to process the previously ingested microscopy images with the scPortrait pipeline to generate single-cell images that we can use to asses autophagosome formation at a single-cell level.

import lamindb as ln
from collections.abc import Iterable

from pathlib import Path
from scportrait.pipeline.extraction import HDF5CellExtraction
from scportrait.pipeline.project import Project
from scportrait.pipeline.segmentation.workflows import CytosolSegmentationCellpose

ln.track()

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→ connected lamindb: testuser1/test-sc-imaging

→ created Transform('3i9RTHAQrEiE0000'), started new Run('OAaMB5WK...') at 2025-05-13 20:04:17 UTC

→ notebook imports: lamindb==1.5.2 scportrait==1.3.5

• recommendation: to identify the notebook across renames, pass the uid: ln.track("3i9RTHAQrEiE")

First, we query for the raw and annotated microscopy images.

input_images = (
    ln.Artifact.filter(ulabels__name="autophagy imaging")
    .filter(description__icontains="raw image")
    .filter(suffix=".tif")
)

The experiment contains different genotypes (WT and EI24KO) that were treated differently (unstimulated vs 14h Torin-1). For each condition, multiple clonal cell lines were imaged across multiple fields of view in all imaging channels. We need to get single-cell images from each FOV indivdually and tag them with all of the appropriate metadata to identify genotype, treatment condition, clonal cell line and imaging experiment.

select_artifacts_df = (
    ln.Artifact.filter(ulabels__name="autophagy imaging")
    .filter(description__icontains="raw image")
    .df(features=True)
)
display(select_artifacts_df.head())

conditions = list(set(select_artifacts_df["stimulation"].values))
cell_line_clones = list(set(select_artifacts_df["cell_line_clone"].values))
FOVs = list(set(select_artifacts_df["FOV"].values))

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→ queried for all categorical features with dtype 'cat[ULabel...'] and non-categorical features: (10) ['genotype', 'stimulation', 'cell_line_clone', 'channel', 'FOV', 'magnification', 'microscope', 'imaged structure', 'resolution', 'study']

	uid	key	genotype	stimulation	cell_line_clone	channel	FOV	magnification	microscope	imaged structure	resolution	study
id
2	Md4OouMExlWS2YfZ0000	input_data_imaging_usecase/images/Timepoint001...	WT	14h Torin-1	U2OS lcklip-mNeon mCherryLC3B clone 1	Alexa488	FOV1	20X	Opera Phenix	LckLip-mNeon	0.597976	autophagy imaging
3	KKbVRkOjQ1jdA2fx0000	input_data_imaging_usecase/images/Timepoint001...	WT	14h Torin-1	U2OS lcklip-mNeon mCherryLC3B clone 1	Alexa488	FOV2	20X	Opera Phenix	LckLip-mNeon	0.597976	autophagy imaging
4	CiQYTBNZrj0CPejK0000	input_data_imaging_usecase/images/Timepoint001...	WT	14h Torin-1	U2OS lcklip-mNeon mCherryLC3B clone 1	DAPI	FOV1	20X	Opera Phenix	DNA	0.597976	autophagy imaging
5	W6tzE7JNiM80Ruho0000	input_data_imaging_usecase/images/Timepoint001...	WT	14h Torin-1	U2OS lcklip-mNeon mCherryLC3B clone 1	DAPI	FOV2	20X	Opera Phenix	DNA	0.597976	autophagy imaging
6	YGiNq6DPfIEjtt9j0000	input_data_imaging_usecase/images/Timepoint001...	WT	14h Torin-1	U2OS lcklip-mNeon mCherryLC3B clone 1	mCherry	FOV1	20X	Opera Phenix	mCherry-LC3B	0.597976	autophagy imaging

Alternatively, query for the ULabel directly:

conditions = ln.ULabel.filter(
    links_artifact__feature__name="stimulation", artifacts__in=input_images
).distinct()
cell_line_clones = ln.ULabel.filter(
    links_artifact__feature__name="cell_line_clone", artifacts__in=input_images
).distinct()
FOVs = ln.ULabel.filter(
    links_artifact__feature__name="FOV", artifacts__in=input_images
).distinct()

By iterating through conditions, celllines and FOVs, we should only have the 3 images showing a single FOV to enable processing using ScPortrait.

# load config file for processing all datasets
config_file_af = ln.Artifact.using("scportrait/examples").get(
    key="input_data_imaging_usecase/config.yml"
)
config_file_af.description = (
    "config for scportrait for processing of cells stained for autophagy markers"
)
config_file_af.save()

# annotate the config file with the metadata relevant to the study
config_file_af.features.add_values(
    {"study": "autophagy imaging", "artifact type": "scportrait config"}
)

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→ mapped records: ULabel(uid='PKiCEP1h')

→ transferred records: Artifact(uid='voi8szTkmKPiahUA0000'), ULabel(uid='hbGRGfA1'), Feature(uid='Kb0eQtlXapg2')

Let’s take a look at the processing of one example FOV.

# get input images for one example FOV
condition = conditions[0]
cellline = cell_line_clones[0]
FOV = FOVs[0]

images = (
    input_images.filter(ulabels=condition)
    .filter(ulabels=cellline)
    .filter(ulabels=FOV)
    .distinct()
)

# Perform quick sanity check that we only have images which share all of their attributed except channel and imaged structure
_features = []
values_to_ignore = ["channel", "imaged structure"]

for af in images:
    features = af.features.get_values()
    features = {
        key: features[key] for key in features.keys() if key not in values_to_ignore
    }
    _features.append(features)
assert all(_features[0] == f for f in _features)
shared_features = _features[0]

# bring image paths into the correct order for processing
input_image_paths = [
    images.filter(ulabels__name=channel_name).one().cache()
    for channel_name in ["DAPI", "Alexa488", "mCherry"]
]

# define and create an output location for the processed data
output_directory = "processed_data"
Path(output_directory).mkdir(parents=True, exist_ok=True)

# initialize our scportrait project with a unique ID
unique_project_id = f"{shared_features['cell_line_clone']}/{shared_features['stimulation']}/{shared_features['FOV']}".replace(
    " ", "_"
)

# create the project location
project_location = f"{output_directory}/{unique_project_id}/scportrait_project"
Path(project_location).mkdir(parents=True, exist_ok=True)

# initialize the project
project = Project(
    project_location=project_location,
    config_path=config_file_af.cache(),
    segmentation_f=CytosolSegmentationCellpose,
    extraction_f=HDF5CellExtraction,
    overwrite=True,
)

# load our input images
project.load_input_from_tif_files(
    input_image_paths, overwrite=True, channel_names=["DAPI", "Alexa488", "mCherry"]
)

# process the project
project.segment()
project.extract()

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Updating project config file.
INFO     The Zarr backing store has been changed from None the new file path:                                      
         processed_data/U2OS_lcklip-mNeon_mCherryLC3B_clone_1/14h_Torin-1/FOV1/scportrait_project/scportrait.sdata 

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

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WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

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WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

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WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

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First, lets look at the input images we processed.

project.plot_input_image()

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Now we can look at the results generated by scPortrait. First the segmentation masks.

project.plot_segmentation_masks()

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And then extraction results consisting of individual single-cell images over all of the channels.

project.plot_single_cell_images()

Now we also want to save these results to our instance.

ln.Artifact.from_spatialdata(
    sdata=project.filehandler.get_sdata(),
    description="scportrait spatialdata object containing results of cells stained for autophagy markers",
    key=f"processed_data_imaging_use_case/{unique_project_id}/spatialdata.zarr",
).save()

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WARNING:ome_zarr.io:version mismatch: detected: RasterFormatV02, requested: FormatV04

INFO     The SpatialData object is not self-contained (i.e. it contains some elements that are Dask-backed from    
         locations outside /home/runner/.cache/lamindb/AhjbaHgevpCd1jgp0000.zarr). Please see the documentation of 
         `is_self_contained()` to understand the implications of working with SpatialData objects that are not     
         self-contained.                                                                                           

INFO     The Zarr backing store has been changed from                                                              
         processed_data/U2OS_lcklip-mNeon_mCherryLC3B_clone_1/14h_Torin-1/FOV1/scportrait_project/scportrait.sdata 
         the new file path: /home/runner/.cache/lamindb/AhjbaHgevpCd1jgp0000.zarr                                  

Artifact(uid='AhjbaHgevpCd1jgp0000', is_latest=True, key='processed_data_imaging_use_case/U2OS_lcklip-mNeon_mCherryLC3B_clone_1/14h_Torin-1/FOV1/spatialdata.zarr', description='scportrait spatialdata object containing results of cells stained for autophagy markers', suffix='.zarr', kind='dataset', otype='SpatialData', size=6859499, hash='33wSvbumU0wLguPkykHqPQ', n_files=75, space_id=1, storage_id=1, run_id=3, created_by_id=1, created_at=2025-05-13 20:05:45 UTC)

# define var schema
varT_schema = ln.Schema(
    name="single-cell image dataset schema var",
    description="column schema for data measured in obsm[single_cell_images]",
    itype=ln.Feature,
).save()

# define obs schema
obs_schema = ln.Schema(
    name="single-cell image dataset schema obs",
    features=[
        ln.Feature(name="scportrait_cell_id", dtype="int", coerce_dtype=True).save(),
    ],
).save()

# define uns schema
uns_schema = ln.Schema(
    name="single-cell image dataset schema uns",
    itype=ln.Feature,
    dtype=dict,
).save()

# define composite schema
h5sc_schema = ln.Schema(
    name="single-cell image dataset",
    otype="AnnData",
    slots={"var.T": varT_schema, "obs": obs_schema, "uns": uns_schema},
).save()

# curate an AnnData
curator = ln.curators.AnnDataCurator(project.h5sc, h5sc_schema)
curator.validate()
artifact = curator.save_artifact(
    key=f"processed_data_imaging_use_case/{unique_project_id}/single_cell_data.h5ad"
)

# add shared annotation
annotation = shared_features.copy()
annotation["imaged structure"] = [
    ln.ULabel.using("scportrait/examples").get(name=structure_name)
    for structure_name in ["LckLip-mNeon", "DNA", "mCherry-LC3B"]
]

artifact.features.add_values(annotation)
artifact.labels.add(ln.ULabel(name="scportrait single-cell images").save())

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! record with similar name exists! did you mean to load it?

	uid	name	description	n	is_type	itype	otype	dtype	hash	minimal_set	ordered_set	maximal_set	_curation	slot	space_id	type_id	validated_by_id	composite_id	run_id	created_at	created_by_id	_aux	_branch_code
id
2	0000000000000000	single-cell image dataset schema var	column schema for data measured in obsm[single...	-1	False	Feature	None	None	kMi7B_N88uu-YnbTLDU-DA	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.117000+00:00	1	{'af': {'2': True}}	1

! records with similar names exist! did you mean to load one of them?

	uid	name	description	n	is_type	itype	otype	dtype	hash	minimal_set	ordered_set	maximal_set	_curation	slot	space_id	type_id	validated_by_id	composite_id	run_id	created_at	created_by_id	_aux	_branch_code
id
2	0000000000000000	single-cell image dataset schema var	column schema for data measured in obsm[single...	-1	False	Feature	None	None	kMi7B_N88uu-YnbTLDU-DA	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.117000+00:00	1	{'af': {'2': True}}	1
3	TRnRtjbekihtt1qs	single-cell image dataset schema obs	None	1	False	Feature	None	None	qpw3p8_e1D7Rc2eqqY07uw	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.143000+00:00	1	{'af': {'2': False}}	1

! records with similar names exist! did you mean to load one of them?

	uid	name	description	n	is_type	itype	otype	dtype	hash	minimal_set	ordered_set	maximal_set	_curation	slot	space_id	type_id	validated_by_id	composite_id	run_id	created_at	created_by_id	_aux	_branch_code
id
2	0000000000000000	single-cell image dataset schema var	column schema for data measured in obsm[single...	-1	False	Feature	None	None	kMi7B_N88uu-YnbTLDU-DA	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.117000+00:00	1	{'af': {'2': True}}	1
3	TRnRtjbekihtt1qs	single-cell image dataset schema obs	None	1	False	Feature	None	None	qpw3p8_e1D7Rc2eqqY07uw	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.143000+00:00	1	{'af': {'2': False}}	1
4	uXaBQX0bGhIdKozU	single-cell image dataset schema uns	None	-1	False	Feature	None	dict	XbQ4ZXD-Z-4hWgth73AO8w	True	False	False	None	None	1	None	None	None	3	2025-05-13 20:05:45.165000+00:00	1	{'af': {'2': True}}	1

! no features found for slot var.T

→ returning existing schema with same hash: Schema(uid='TRnRtjbekihtt1qs', name='single-cell image dataset schema obs', n=1, is_type=False, itype='Feature', hash='qpw3p8_e1D7Rc2eqqY07uw', minimal_set=True, ordered_set=False, maximal_set=False, space_id=1, created_by_id=1, run_id=3, created_at=2025-05-13 20:05:45 UTC)

! no features found for slot uns

To make our lives easier so that we can process all of the files in our dataset we are going to write a custom image processing function. We decorate this function with :func:~lamindb.tracked to track data lineage of the input and output Artifacts. To improve processing time we will only recompute datasets that have not been previously processed and uploaded to our instance.

@ln.tracked()
def _process_images(
    config_file_af: ln.Artifact,
    input_artifacts: Iterable[ln.Artifact],
    h5sc_schema: ln.Schema,
    output_directory: str,
) -> None:
    # Perform quick sanity check that we only have images which share all of their attributes except channel and imaged structure
    _features = []
    values_to_ignore = ["channel", "imaged structure"]

    for af in input_artifacts:
        features = af.features.get_values()
        features = {
            key: features[key] for key in features.keys() if key not in values_to_ignore
        }
        _features.append(features)
    assert all(_features[0] == f for f in _features)
    shared_features = _features[0]

    # create a unique identifier for the project based on the annotated features
    unique_project_id = f"{shared_features['cell_line_clone']}/{shared_features['stimulation']}/{shared_features['FOV']}".replace(
        " ", "_"
    )

    # check if processed results already exist and if so skip processing
    try:
        # check for single-cell images
        (
            ln.Artifact.using("scportrait/examples").get(
                key=f"processed_data_imaging_use_case/{unique_project_id}/single_cell_data.h5ad"
            )
        )

        # check for SpatialData object
        (
            ln.Artifact.using("scportrait/examples").get(
                key=f"processed_data_imaging_use_case/{unique_project_id}/spatialdata.zarr"
            )
        )
        print(
            "Dataset already processed and results uploaded to instance. Skipping processing."
        )
    except ln.Artifact.DoesNotExist:
        input_image_paths = [
            input_artifacts.filter(ulabels__name=channel_name).one().cache()
            for channel_name in ["DAPI", "Alexa488", "mCherry"]
        ]

        # create the project location
        project_location = f"{output_directory}/{unique_project_id}/scportrait_project"
        Path(project_location).mkdir(parents=True, exist_ok=True)

        project = Project(
            project_location=project_location,
            config_path=config_file_af.cache(),
            segmentation_f=CytosolSegmentationCellpose,
            extraction_f=HDF5CellExtraction,
            overwrite=True,
        )

        # process the project
        project.load_input_from_tif_files(
            input_image_paths,
            overwrite=True,
            channel_names=["DAPI", "Alexa488", "mCherry"],
        )
        project.segment()
        project.extract()

        # ingest results to instance
        # single-cell images
        curator = ln.curators.AnnDataCurator(project.h5sc, h5sc_schema)
        artifact = curator.save_artifact(
            key=f"processed_data_imaging_use_case/{unique_project_id}/single_cell_data.h5ad"
        )
        annotation = shared_features.copy()
        annotation["imaged structure"] = [
            ln.ULabel.using("scportrait/examples").get(name=structure_name)
            for structure_name in ["LckLip-mNeon", "DNA", "mCherry-LC3B"]
        ]
        artifact.features.add_values(annotation)
        artifact.labels.add(ln.ULabel.get(name="scportrait single-cell images"))

        # SpatialData object
        ln.Artifact.from_spatialdata(
            sdata=project.filehandler.get_sdata(),
            description="scportrait spatialdata object containing results of cells stained for autophagy markers",
            key=f"processed_data_imaging_use_case/{unique_project_id}/spatialdata.zarr",
        ).save()

    return None

ln.Param(name="output_directory", dtype="str").save()

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Feature(uid='vZm9FPbCajkW', name='output_directory', dtype='str', array_rank=0, array_size=0, space_id=1, created_by_id=1, run_id=3, created_at=2025-05-13 20:05:45 UTC)

Now we are ready to process all of our input images and upload the generated single-cell image datasets back to our instance.

for condition in conditions:
    for cellline in cell_line_clones:
        for FOV in FOVs:
            images = (
                input_images.filter(ulabels=condition)
                .filter(ulabels=cellline)
                .filter(ulabels=FOV)
                .distinct()
            )

            if images:
                _process_images(
                    config_file_af,
                    input_artifacts=images,
                    h5sc_schema=h5sc_schema,
                    output_directory=output_directory,
                )

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! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Md4OouMExlWS2YfZ0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0aoXxT857VvKAGo9UQo-8g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='CiQYTBNZrj0CPejK0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YRjhTt2cBLq3BukWLUKC_w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YGiNq6DPfIEjtt9j0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r003_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='zptjd_tR7P2Nw6mjUWbEjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='KKbVRkOjQ1jdA2fx0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_Alexa488_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Mm-DsaVdkMbTreUW_ipQBQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='W6tzE7JNiM80Ruho0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_DAPI_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9_LVWK08Z_D4c1mvIJlTOA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='uuh41FAHEz0ASL2N0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well01_mCherry_zstack001_r004_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='PSnZ2s1_uJa9G4_cc2HpNw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='yiIMSAddDWgLgki70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='KUhrzT6sDoICDg9cGCUkmg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='DEzw4QQAsjVZ010b0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='N2xVJ8pQ9jWoywub8om_iQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hbVyCGFARHU91Kax0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r005_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='U2Hrdj8bUugok31k_uqEuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='2ie2Kjzn1O7UYhuq0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_Alexa488_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='xkGVufN-7DDAZOeh4h7LpA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fOQSb7JCK67aeN6a0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_DAPI_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='aNYMykHkxezUxs-07xgikw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='qHQpdWcFu7FzF6l50000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well01_mCherry_zstack001_r008_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='_eUmLccyLWPhCAZBQ8a3zA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='jVytS8AyAHmHkYR30000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='QFmofkisy-sibXAuKrpfRw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='cw4F6bUB9zuMthCY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='f4Vij96NOq7M96SXfyEYXQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='7TZGXvbA0JLL68hR0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c007.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='qUKQaesz-vfPUwljqPlIjA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='vCVbKkzz4CnJPPKF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_Alexa488_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='WyabAqK4jeZtTtrQ9rvUeQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='5kMhlcDNek4RMeQF0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_DAPI_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='eXaBPwLJJ--9SyGD7JR0ew', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='9BmbViqMmlVhpfS00000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well01_mCherry_zstack001_r001_c008.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='EeQ_zoM4j8waIP8wP-u0Hg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='OS0wBE7bviIlW7qj0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='RwasAYhkUEeTVBFrwCbKuw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='ixOpuSTsyrPXdYuA0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='diUYJPHgU_SvK0zTrrzUlw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uMjKAk1aYlAV7Cf0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c002.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9K0N7dMe59K6zYUtjE74cA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='9ZVngbl0JUS0XdZ70000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_Alexa488_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='W1Q1RQCUj7j4e9R5Sta4wQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='IzP3IAwIhmM7OORD0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_DAPI_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='dIUw6okO0jOq6JcgsxDktA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='RRVS8qVx3VSw02Xu0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well01_mCherry_zstack001_r001_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9ZmlWOdgh9GFPd4BCYO7GQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Gtwi9Pcyx8maQEWB0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='yJMlFFYyup0JmBu_FjTa3g', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='sHHpiiFYWsIXMZNV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='6pvuFREF3CQ8xr8Urak52Q', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='hNMkrIHce1XrLZHY0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='K1jGiIE0dljR_qYP1btlyw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='nSZhAypqiNZ2Ylbe0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_Alexa488_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='uh537K7rMhMNKW-mti1vjw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='jzqxtoduIJ3hCbB40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_DAPI_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='SOxM7EH80KPXK3hzBxXYLg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='M06liaIzh2OVEuJ40000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row01_Well08_mCherry_zstack001_r002_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='0tV4uQYxnP6G8JOrAwMyXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='mXWwV1x42Jz9RoSO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='4xc4bpAMo0UaM_tc8SciIA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='gj0HHnoVpEqbaUJb0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fZ4W2ePHagfGUGCcve98gQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='1XnEyqVt6UGXCTmV0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='if3WCKH91_CY0ptIVYuLmA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Ov8FnKzHMNY0XVJa0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_Alexa488_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='5cfc02GejBaoJ0h3OLWSdw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='Lwk8shsYe0V5bMgd0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_DAPI_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='CmAa139DH_lQ2Plcy4BxXw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='YuyVn060M4FxATPz0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row02_Well08_mCherry_zstack001_r002_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='gZHwk76xPz7qXiST4RuVMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='ThuJnRAhqkp54kyU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='vs3t8d40w259zgJRltHlKA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='PquYNyshQTDd24Vw0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='1mSZ_MMg393bfTvMOl3YMQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='8SFUmW0RhBNySxBO0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c009.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='fjO8ly0euUPHXoQd86weww', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='h4EKWveW36LIzXez0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_Alexa488_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='ZPUWq_TI3KWNcVeVz3vOPg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='fdem35nw5ztUnEIM0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_DAPI_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='XuugTTV9S5TbJKVMLOaR0w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='VkmKLUCaMsYFCuGE0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row03_Well08_mCherry_zstack001_r010_c010.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='A-MzQvq-kHeu1WHdVmm5bw', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='QDPX1ljp0eCMz80o0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='Y1bgVRJGzIEhKFGP54fplA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:24 UTC), Artifact(uid='Cvamog4G3a2XYGM80000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='UFjAP7uBiaM9ivE4hJzHTA', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='6uUjyphUD4D1Hixc0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c003.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='lvFoCpbAkjg4mEtXx-D99w', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.
! cannot infer feature type of: <ArtifactQuerySet [Artifact(uid='Oww4y0yYuR8pxV9q0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_Alexa488_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='YX1aIPYndKFiPl5W3OPqfQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AhBvnNKg5yJcG6LU0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_DAPI_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='9I6amjQc298AZvER1Z2jjQ', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC), Artifact(uid='AVRTVX9gEu4LrTAP0000', is_latest=True, key='input_data_imaging_usecase/images/Timepoint001_Row04_Well08_mCherry_zstack001_r001_c005.tif', description='raw image of U2OS cells stained for autophagy markers', suffix='.tif', size=2333056, hash='rYoK8xKXBtx5aNW4AfUbUg', space_id=1, storage_id=2, run_id=2, created_by_id=1, created_at=2025-03-07 13:51:25 UTC)]>, returning '?

/opt/hostedtoolcache/Python/3.12.10/x64/lib/python3.12/site-packages/lamindb/_tracked.py:115: FutureWarning: Use features instead of params, params will be removed in the future.
  run.params.add_values(filtered_params)

Dataset already processed and results uploaded to instance. Skipping processing.

example_artifact = ln.Artifact.filter(
    ulabels=ln.ULabel.get(name="scportrait single-cell images")
)[0]
example_artifact.view_lineage()

ln.finish()

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→ finished Run('OAaMB5WK') after 2m at 2025-05-13 20:06:36 UTC