bionty.DevelopmentalStage

class bionty.DevelopmentalStage(name: str, ontology_id: str | None, abbr: str | None, synonyms: str | None, description: str | None, parents: list[DevelopmentalStage], public_source: PublicSource | None)

Bases: BioRegistry, TracksRun, TracksUpdates

Developmental stages - Human Developmental Stages, Mouse Developmental Stages. # noqa.

Notes

For more info, see tutorials Manage biological registries and DevelopmentalStage.

Bulk create DevelopmentalStage records via from_values.

Examples

>>> record = bionty.DevelopmentalStage.from_public(name="neurula stage")
>>> record.save()

Fields

run ForeignKey

Last run that created or updated the record. Run

id AutoField

Internal id, valid only in one DB instance.

uid CharField

A universal id (hash of selected field).

name CharField

Name of the developmental stage.

ontology_id CharField

Ontology ID of the developmental stage.

abbr CharField

A unique abbreviation of developmental stage.

synonyms TextField

Bar-separated (|) synonyms that correspond to this developmental stage.

description TextField

Description of the developmental stage.

public_source ForeignKey

PublicSource this developmental stage associates with.

previous_runs ManyToManyField

Sequence of runs that created or updated the record.

parents ManyToManyField

Parent developmental stage records.

artifacts ManyToManyField

Artifacts linked to the developmental stage.

created_at DateTimeField

Time of creation of record.

created_by ForeignKey

Creator of record. User

updated_at DateTimeField

Time of last update to record.

Methods