R: `laminr`¶

R client for LaminDB [source].

Install the laminr package.

install.packages("laminr", dependencies = TRUE)

Create a LaminDB instance:

lc <- import_module("lamin_cli")
lc$init(storage = "./mydata", modules = "bionty")

Or if you have write access to an instance, login and connect to it:

lc$login()
lc$connect("<account>/<instance>")

For more detailed instructions, see Setting up LaminR.

In an R session, create the central API object as follows.

library(laminr)
ln <- import_module("lamindb")

The ln object the offers the full lamindb API and can be used in the same way up to replacing Python’s . with R’s $.

To access the lamin CLI functionality, import the lamin_cli module:

lc <- import_module("lamin_cli")

lc$init()
lc$connect()
lc$disconnect()
lc$login()
lc$logout()
lc$save()
lc$delete()

R: laminr¶