bionty.CellMarker¶
- class bionty.CellMarker(name: str, synonyms: str | None, gene_symbol: str | None, ncbi_gene_id: str | None, uniprotkb_id: str | None, organism: Organism | None, source: Source | None)¶
Bases:
BioRecord
,TracksRun
,TracksUpdates
Cell markers - CellMarker.
Notes
For more info, see tutorials Manage biological registries and CellMarker.
Bulk create CellMarker records via
from_values
.Examples
>>> record = bionty.CellMarker.from_public(name="PD1", organism="human")
Fields¶
- run: Run¶
Last run that created or updated the record.
- id¶
Internal id, valid only in one DB instance.
- uid¶
A universal id (hash of selected field).
- name¶
Unique name of the cell marker.
- synonyms¶
Bar-separated (|) synonyms that correspond to this cell marker.
- description¶
Description of the cell marker.
- gene_symbol¶
Gene symbol that corresponds to this cell marker.
- ncbi_gene_id¶
NCBI gene id that corresponds to this cell marker.
- uniprotkb_id¶
Uniprotkb id that corresponds to this cell marker.
- previous_runs: Run¶
Sequence of runs that created or updated the record.
- artifacts¶
Artifacts linked to the cell marker.
- feature_sets¶
Featuresets linked to this cell marker.
- created_at: datetime¶
Time of creation of record.
- created_by: User¶
Creator of record.
- updated_at: datetime¶
Time of last update to record.
Methods¶