Soon
ΒΆ
hubΒΆ
:sparkles: Link artifacts to records PR @chaichontat
dbΒΆ
β¨ Enable configuring env modules PR @falexwolf
πΈ Re-connect rather than reset Django if no instance is configured in the environment PR @falexwolf
:children_crossing: Re-connect Django rather than reset Django when no instance is configured in the environment PR @falexwolf
β¨ Allow users to specify partially available keys in
MappedCollectionand retrieveraw.XPR @Koncopd⨠Improve data retrieval in
MappedCollectionPR @mojtababahramiβ‘οΈ Profile
ln.connect()PR @falexwolfπ Warn when connecting to a public db connection PR @Koncopd
β‘οΈ Optimize DB interactions in lightning integration PR @falexwolf
π Fix feature collisions in lightning integration PR @falexwolf
π· Add an option to install full dependencies to
lamindb-corePR @Koncopdπ½οΈ Restore receiving AWS credentials through the dedicated endpoint PR @Koncopd
ποΈ Add
lamindb-coreto distributelamindbwithout optional dependencies PR @falexwolf:memo: README v5.5: Prettified LaminDB schematic PR @falexwolf
πΈ Refactor plan saving to strip TODOs from description PR @falexwolf
π· Run tests also from
lamin-cli, not only fromlamindbPR @falexwolfπ Enable deleting mark files in
delete_instanceand useaccess_tokendepending in client PR @Koncopdπ Document agent plan tracking also in README and
ln.track()API reference PR @falexwolfπ Fix hostdb for features getitem PR @sunnyosun
β¬οΈ Bump lamin-utils PR @sunnyosun
π· Refactor package testing setup with
lamin_lambda_utilsPR @falexwolf⨠Refresh federated AWS credentials on the
botocorelevel PR @Koncopdβ»οΈ Refactor migration logic PR @falexwolf
π Do not execute the new block in the
trackguide PR @falexwolfπ Add Change Management section to
READMEand Agent Plans section totrackguide PR @falexwolf
usecasesΒΆ
πΈ No need for a LaminDB instance just to query PR @falexwolf
π¨ Fix formatting in the spatial guide PR @namsaraeva
π Remove scanpy pinning PR @namsaraeva
π· Clean up repo PR @falexwolf
β»οΈ Convert ipynb to md PR @falexwolf
β»οΈ Convert ipynb to md PR @falexwolf
β»οΈ Convert ipynb to md PR @falexwolf
β»οΈ Convert ipynb to md PR @falexwolf
β»οΈ Convert ipynb to md PR @falexwolf
π Update guides to reflect the overhauled
lightningintegration PR @Zethsonβ»οΈ Simplify and clarify usage of
@ln.flow()PR @falexwolfπ Fix
_set_default_colors_for_categorical_obsfor the spatial guide PR @namsaraevaπ· Polish repo setup PR @falexwolf
π Rename wetlab to pertdb PR @sunnyosun
π Polish 3 βLeverage ontologiesβ guides and the
geneguide PR @sunnyosunπ Fix CI PR @sunnyosun
ποΈ Use
_dtype_strrather thandtypePR @falexwolfπ Fix errors and outdated code in cellxgene guide PR @sunnyosun
π Overhaul the
spatialdataguide PR @namsaraevaπ Fix CI PR @sunnyosun
β»οΈ Rename QueryDB to DB and arc_db to db PR @falexwolf
π Rename
QueryDBtoDBandcxg_dbtodbPR @falexwolfUpdate notebook link and dataset description in spatial4 PR @namsaraeva
β»οΈ Migrate
scrna2to schema-based curator and simplify heavily PR @falexwolfπ Rename
.using()to.connect()PR @falexwolfRemove hide output from code cell in sc-imaging4 PR @namsaraeva
π₯ Remove
analysis-flowuse case PR @falexwolfπ Rename
df()toto_dataframe()PR @falexwolfπ Rename
.df()to.to_dataframe()PR @falexwolfβ»οΈ Move
arc-virtual-cell-atlasandhubmapnotebook here PR @falexwolfβ»οΈ Canonicalize import patterns PR @falexwolf
biontyΒΆ
β»οΈ Clean up migrations PR @falexwolf
β‘οΈ Squash migrations PR @falexwolf
ποΈ Add
created_onfield for LaminDB v2.2 PR @falexwolfβ‘οΈ Lazily import pandas PR @falexwolf
Update README PR @falexwolf