SoonΒΆ
hubΒΆ
π Fix display of dropdown behind
Schema
filter button onArtifacts
page PR @falexwolfπ Display transform keys PR @sunnyosun
π Create a more intuitive artifact page PR @chaichontat
Allow editing of transform name and attaching/detaching labels PR @awgaan
β¨ Dynamic code copy for R and Python PR @chaichontat
πΈ Improve speed and relevance of search PR @falexwolf
v0.31.0 PR @chaichontat
dbΒΆ
π Fix notebook re-run with same hash PR @falexwolf
β»οΈ Exclude
DoesNotExist
inprivate-django-api
PR @falexwolfπ Automatically add missing columns upon
.standardize()
ifnullable
isTrue
PR @falexwolf⨠Allow to specify
fsspec
upload options inArtifact.save
PR @Koncopd⨠Write
Artifact.n_observations
inArtifact.from_df()
PR @Koncopdπ Fix docs build PR @falexwolf
usecasesΒΆ
π Add
PertCurator
notebook back PR @falexwolfπ Prettify and fix PR @falexwolf
π Move
PertCurator
intolamindb
PR @falexwolfπ Rename
artifact.biosamples
toartifact.clinicore_biosamples
PR @sunnyosunβ»οΈ Squash migrations PR @falexwolf
βͺοΈ Revert donor to ULabel PR @sunnyosun
π Map feature
donor_id
toDonor.name
PR @sunnyosunπ¨ Sort curated columns in
PertCurator
PR @sunnyosunπ Fix PR @falexwolf
π¨ Make sure
pert_
column categories are consistent PR @sunnyosunπ Deprecate the
--schema
argument oflamin init
in favor of--modules
PR @falexwolfβ¬οΈ Upgrade to lamindb 1.0a1 PR @falexwolf
π Migrate to lamindb 1.0 PR @falexwolf
π Migrate to lamindb 1.0 PR @falexwolf
π Migrate to lamindb 1.0 PR @falexwolf
β Fail CI if
cellxgene-schema
CLI validation fails PR @Zethsonπ¨ Set up sources dynamically PR @sunnyosun
π¨ Do not check embedding in .validate PR @sunnyosun
ποΈ Integrate
lnschema-core
intolamindb
PR @falexwolfποΈ Integrate
lnschema-core
intolamindb
PR @falexwolfποΈ Integrate
lnschema-core
intolamindb
PR @falexwolf⨠PertCurator PR @sunnyosun
β¬οΈ Fix import PR @sunnyosun
π Fix docs & import PR @falexwolf
π± Create the Biologic registry PR @falexwolf
π Fix pert nb PR @sunnyosun
π¨ Fix model relationships PR @sunnyosun
β¨ Rename
Treatment
toPerturbation
, addDonor
registry, improveGeneticPerturbationSystem
typing PR @Zethsonπ¨ Fix link tables of Biosample and Techsample PR @sunnyosun
π Fix for 0.77.1 PR @falexwolf
β¨ Add script to add references to existing corpus PR @Zethson
π¨ Re-create 1st migration PR @sunnyosun
π¨ Clean up PR @sunnyosun
β¬οΈ Clean up PR @sunnyosun
π¨ Clean up PR @sunnyosun
β¬οΈ Update lamindb PR @sunnyosun
β¬οΈ Update lamindb deps PR @sunnyosun
π Fix literal PR @sunnyosun
biontyΒΆ
β»οΈ Resquash migrations PR @falexwolf
β»οΈ Add data migration for source uids PR @falexwolf
π± Adjust migration to 8-char Source uid PR @falexwolf
β»οΈ Increase uid length for
Source
to 8 chars PR @falexwolfβ»οΈ Point to new squashed migration PR @falexwolf
β»οΈ Reconfigure migrations PR @falexwolf
π¨ Improve
from_source
docstrings for entities PR @Zethsonβ»οΈ Squash migrations PR @falexwolf
β»οΈ Port simplified deprecation strategy PR @falexwolf
β»οΈ Create backward accessors on
SchemaFeature
link models PR @falexwolfπ Rename
FeatureSet
toSchema
and migrate to lamindb 1.0a5 PR @falexwolfπ Deprecate the
--schema
argument oflamin init
in favor of--modules
PR @falexwolfπ Migrate to lamindb 1.0 PR @falexwolf
ποΈ Integrate
lnschema-core
intolamindb
PR @falexwolf